import importlib import os import re import sys from datetime import datetime from docutils import nodes from docutils.parsers.rst import Directive # Minimum version, enforced by sphinx needs_sphinx = '4.3' # This is a nasty hack to use platform-agnostic names for types in the # documentation. # must be kept alive to hold the patched names _name_cache = {} def replace_scalar_type_names(): """ Rename numpy types to use the canonical names to make sphinx behave """ import ctypes sizeof_void_p = ctypes.sizeof(ctypes.c_void_p) Py_ssize_t = ctypes.c_int64 if sizeof_void_p == 8 else ctypes.c_int32 class PyObject(ctypes.Structure): pass class PyTypeObject(ctypes.Structure): pass PyObject._fields_ = [ ('ob_refcnt', Py_ssize_t), ('ob_type', ctypes.POINTER(PyTypeObject)), ] PyTypeObject._fields_ = [ # varhead ('ob_base', PyObject), ('ob_size', Py_ssize_t), # declaration ('tp_name', ctypes.c_char_p), ] import numpy # change the __name__ of the scalar types for name in [ 'byte', 'short', 'intc', 'int_', 'longlong', 'ubyte', 'ushort', 'uintc', 'uint', 'ulonglong', 'half', 'single', 'double', 'longdouble', 'half', 'csingle', 'cdouble', 'clongdouble', ]: typ = getattr(numpy, name) c_typ = PyTypeObject.from_address(id(typ)) if sys.implementation.name == 'cpython': c_typ.tp_name = _name_cache[typ] = b"numpy." + name.encode('utf8') else: # It is not guarenteed that the c_typ has this model on other # implementations _name_cache[typ] = b"numpy." + name.encode('utf8') replace_scalar_type_names() # As of NumPy 1.25, a deprecation of `str`/`bytes` attributes happens. # For some reasons, the doc build accesses these, so ignore them. import warnings warnings.filterwarnings("ignore", "In the future.*NumPy scalar", FutureWarning) # ----------------------------------------------------------------------------- # General configuration # ----------------------------------------------------------------------------- # Add any Sphinx extension module names here, as strings. They can be extensions # coming with Sphinx (named 'sphinx.ext.*') or your custom ones. sys.path.insert(0, os.path.abspath('../sphinxext')) extensions = [ 'sphinx.ext.autodoc', 'numpydoc', 'sphinx.ext.intersphinx', 'sphinx.ext.coverage', 'sphinx.ext.doctest', 'sphinx.ext.autosummary', 'sphinx.ext.graphviz', 'sphinx.ext.ifconfig', 'matplotlib.sphinxext.plot_directive', 'IPython.sphinxext.ipython_console_highlighting', 'IPython.sphinxext.ipython_directive', 'sphinx.ext.mathjax', 'sphinx_copybutton', 'sphinx_design', 'sphinx.ext.imgconverter', 'jupyterlite_sphinx', ] skippable_extensions = [ ('breathe', 'skip generating C/C++ API from comment blocks.'), ] for ext, warn in skippable_extensions: ext_exist = importlib.util.find_spec(ext) is not None if ext_exist: extensions.append(ext) else: print(f"Unable to find Sphinx extension '{ext}', {warn}.") # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix of source filenames. source_suffix = '.rst' # General substitutions. project = 'NumPy' year = datetime.now().year copyright = f'2008-{year}, NumPy Developers' # The default replacements for |version| and |release|, also used in various # other places throughout the built documents. # import numpy # The short X.Y version (including .devXXXX, rcX, b1 suffixes if present) version = re.sub(r'(\d+\.\d+)\.\d+(.*)', r'\1\2', numpy.__version__) version = re.sub(r'(\.dev\d+).*?$', r'\1', version) # The full version, including alpha/beta/rc tags. release = numpy.__version__ print(f"{version} {release}") # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: #today = '' # Else, today_fmt is used as the format for a strftime call. today_fmt = '%B %d, %Y' # List of documents that shouldn't be included in the build. #unused_docs = [] # The reST default role (used for this markup: `text`) to use for all documents. default_role = "autolink" # List of directories, relative to source directories, that shouldn't be searched # for source files. exclude_dirs = [] exclude_patterns = [] suppress_warnings = [] nitpick_ignore = [] if sys.version_info[:2] >= (3, 12): exclude_patterns += [ "reference/distutils.rst", "reference/distutils/misc_util.rst", ] suppress_warnings += [ 'toc.excluded', # Suppress warnings about excluded toctree entries ] nitpicky = True nitpick_ignore += [ ('ref', 'numpy-distutils-refguide'), # The first ignore is not catpured without nitpicky = True. # These three ignores are required once nitpicky = True is set. ('py:mod', 'numpy.distutils'), ('py:class', 'Extension'), ('py:class', 'numpy.distutils.misc_util.Configuration'), ] # If true, '()' will be appended to :func: etc. cross-reference text. add_function_parentheses = False # If true, the current module name will be prepended to all description # unit titles (such as .. function::). #add_module_names = True # If true, sectionauthor and moduleauthor directives will be shown in the # output. They are ignored by default. #show_authors = False class LegacyDirective(Directive): """ Adapted from docutils/parsers/rst/directives/admonitions.py Uses a default text if the directive does not have contents. If it does, the default text is concatenated to the contents. See also the same implementation in SciPy's conf.py. """ has_content = True node_class = nodes.admonition optional_arguments = 1 def run(self): try: obj = self.arguments[0] except IndexError: # Argument is empty; use default text obj = "submodule" text = (f"This {obj} is considered legacy and will no longer receive " "updates. This could also mean it will be removed in future " "NumPy versions.") try: self.content[0] = text + " " + self.content[0] except IndexError: # Content is empty; use the default text source, lineno = self.state_machine.get_source_and_line( self.lineno ) self.content.append( text, source=source, offset=lineno ) text = '\n'.join(self.content) # Create the admonition node, to be populated by `nested_parse` admonition_node = self.node_class(rawsource=text) # Set custom title title_text = "Legacy" textnodes, _ = self.state.inline_text(title_text, self.lineno) title = nodes.title(title_text, '', *textnodes) # Set up admonition node admonition_node += title # Select custom class for CSS styling admonition_node['classes'] = ['admonition-legacy'] # Parse the directive contents self.state.nested_parse(self.content, self.content_offset, admonition_node) return [admonition_node] def setup(app): # add a config value for `ifconfig` directives app.add_config_value('python_version_major', str(sys.version_info.major), 'env') app.add_lexer('NumPyC', NumPyLexer) app.add_directive("legacy", LegacyDirective) # While these objects do have type `module`, the names are aliases for modules # elsewhere. Sphinx does not support referring to modules by an aliases name, # so we make the alias look like a "real" module for it. # If we deemed it desirable, we could in future make these real modules, which # would make `from numpy.char import split` work. sys.modules['numpy.char'] = numpy.char # ----------------------------------------------------------------------------- # HTML output # ----------------------------------------------------------------------------- html_theme = 'pydata_sphinx_theme' html_favicon = '_static/favicon/favicon.ico' # Set up the version switcher. The versions.json is stored in the doc repo. if os.environ.get('CIRCLE_JOB') and os.environ['CIRCLE_BRANCH'] != 'main': # For PR, name is set to its ref switcher_version = os.environ['CIRCLE_BRANCH'] elif ".dev" in version: switcher_version = "devdocs" else: switcher_version = f"{version}" html_theme_options = { "logo": { "image_light": "_static/numpylogo.svg", "image_dark": "_static/numpylogo_dark.svg", }, "github_url": "https://github.com/numpy/numpy", "collapse_navigation": True, "external_links": [ {"name": "Learn", "url": "https://numpy.org/numpy-tutorials/"}, {"name": "NEPs", "url": "https://numpy.org/neps"}, ], "header_links_before_dropdown": 6, # Add light/dark mode and documentation version switcher: "navbar_end": [ "search-button", "theme-switcher", "version-switcher", "navbar-icon-links" ], "navbar_persistent": [], "switcher": { "version_match": switcher_version, "json_url": "https://numpy.org/doc/_static/versions.json", }, "show_version_warning_banner": True, } html_title = f"{project} v{version} Manual" html_static_path = ['_static'] html_last_updated_fmt = '%b %d, %Y' html_css_files = ["numpy.css"] html_context = {"default_mode": "light"} html_use_modindex = True html_copy_source = False html_domain_indices = False html_file_suffix = '.html' htmlhelp_basename = 'numpy' if 'sphinx.ext.pngmath' in extensions: pngmath_use_preview = True pngmath_dvipng_args = ['-gamma', '1.5', '-D', '96', '-bg', 'Transparent'] mathjax_path = "scipy-mathjax/MathJax.js?config=scipy-mathjax" plot_html_show_formats = False plot_html_show_source_link = False # sphinx-copybutton configurations copybutton_prompt_text = r">>> |\.\.\. |\$ |In \[\d*\]: | {2,5}\.\.\.: | {5,8}: " copybutton_prompt_is_regexp = True # ----------------------------------------------------------------------------- # LaTeX output # ----------------------------------------------------------------------------- # The paper size ('letter' or 'a4'). #latex_paper_size = 'letter' # The font size ('10pt', '11pt' or '12pt'). #latex_font_size = '10pt' # XeLaTeX for better support of unicode characters latex_engine = 'xelatex' # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, author, document class [howto/manual]). _stdauthor = 'Written by the NumPy community' latex_documents = [ ('reference/index', 'numpy-ref.tex', 'NumPy Reference', _stdauthor, 'manual'), ('user/index', 'numpy-user.tex', 'NumPy User Guide', _stdauthor, 'manual'), ] # The name of an image file (relative to this directory) to place at the top of # the title page. #latex_logo = None # For "manual" documents, if this is true, then toplevel headings are parts, # not chapters. #latex_use_parts = False latex_elements = { } # Additional stuff for the LaTeX preamble. latex_elements['preamble'] = r''' \newfontfamily\FontForChinese{FandolSong-Regular}[Extension=.otf] \catcode`琴\active\protected\def琴{{\FontForChinese\string琴}} \catcode`春\active\protected\def春{{\FontForChinese\string春}} \catcode`鈴\active\protected\def鈴{{\FontForChinese\string鈴}} \catcode`猫\active\protected\def猫{{\FontForChinese\string猫}} \catcode`傅\active\protected\def傅{{\FontForChinese\string傅}} \catcode`立\active\protected\def立{{\FontForChinese\string立}} \catcode`业\active\protected\def业{{\FontForChinese\string业}} \catcode`(\active\protected\def({{\FontForChinese\string(}} \catcode`)\active\protected\def){{\FontForChinese\string)}} % In the parameters section, place a newline after the Parameters % header. This is default with Sphinx 5.0.0+, so no need for % the old hack then. % Unfortunately sphinx.sty 5.0.0 did not bump its version date % so we check rather sphinxpackagefootnote.sty (which exists % since Sphinx 4.0.0). \makeatletter \@ifpackagelater{sphinxpackagefootnote}{2022/02/12} {}% Sphinx >= 5.0.0, nothing to do {% \usepackage{expdlist} \let\latexdescription=\description \def\description{\latexdescription{}{} \breaklabel} % but expdlist old LaTeX package requires fixes: % 1) remove extra space \usepackage{etoolbox} \patchcmd\@item{{\@breaklabel} }{{\@breaklabel}}{}{} % 2) fix bug in expdlist's way of breaking the line after long item label \def\breaklabel{% \def\@breaklabel{% \leavevmode\par % now a hack because Sphinx inserts \leavevmode after term node \def\leavevmode{\def\leavevmode{\unhbox\voidb@x}}% }% } }% Sphinx < 5.0.0 (and assumed >= 4.0.0) \makeatother % Make Examples/etc section headers smaller and more compact \makeatletter \titleformat{\paragraph}{\normalsize\py@HeaderFamily}% {\py@TitleColor}{0em}{\py@TitleColor}{\py@NormalColor} \titlespacing*{\paragraph}{0pt}{1ex}{0pt} \makeatother % Fix footer/header \renewcommand{\chaptermark}[1]{\markboth{\MakeUppercase{\thechapter.\ #1}}{}} \renewcommand{\sectionmark}[1]{\markright{\MakeUppercase{\thesection.\ #1}}} ''' # Documents to append as an appendix to all manuals. #latex_appendices = [] # If false, no module index is generated. latex_use_modindex = False # ----------------------------------------------------------------------------- # Texinfo output # ----------------------------------------------------------------------------- texinfo_documents = [ ("index", 'numpy', 'NumPy Documentation', _stdauthor, 'NumPy', "NumPy: array processing for numbers, strings, records, and objects.", 'Programming', 1), ] # ----------------------------------------------------------------------------- # Intersphinx configuration # ----------------------------------------------------------------------------- intersphinx_mapping = { 'neps': ('https://numpy.org/neps', None), 'python': ('https://docs.python.org/3', None), 'scipy': ('https://docs.scipy.org/doc/scipy', None), 'matplotlib': ('https://matplotlib.org/stable', None), 'imageio': ('https://imageio.readthedocs.io/en/stable', None), 'skimage': ('https://scikit-image.org/docs/stable', None), 'pandas': ('https://pandas.pydata.org/pandas-docs/stable', None), 'scipy-lecture-notes': ('https://scipy-lectures.org', None), 'pytest': ('https://docs.pytest.org/en/stable', None), 'numpy-tutorials': ('https://numpy.org/numpy-tutorials', None), 'numpydoc': ('https://numpydoc.readthedocs.io/en/latest', None), 'dlpack': ('https://dmlc.github.io/dlpack/latest', None) } # ----------------------------------------------------------------------------- # NumPy extensions # ----------------------------------------------------------------------------- # If we want to do a phantom import from an XML file for all autodocs phantom_import_file = 'dump.xml' # Make numpydoc to generate plots for example sections numpydoc_use_plots = True # ----------------------------------------------------------------------------- # Autosummary # ----------------------------------------------------------------------------- autosummary_generate = True # ----------------------------------------------------------------------------- # Coverage checker # ----------------------------------------------------------------------------- coverage_ignore_modules = [] coverage_ignore_functions = [ 'test($|_)', '(some|all)true', 'bitwise_not', 'cumproduct', 'pkgload', 'generic\\.' ] coverage_ignore_classes = [] coverage_c_path = [] coverage_c_regexes = {} coverage_ignore_c_items = {} # ----------------------------------------------------------------------------- # Plots # ----------------------------------------------------------------------------- plot_pre_code = """ import numpy as np np.random.seed(0) """ plot_include_source = True plot_formats = [('png', 100), 'pdf'] import math phi = (math.sqrt(5) + 1) / 2 plot_rcparams = { 'font.size': 8, 'axes.titlesize': 8, 'axes.labelsize': 8, 'xtick.labelsize': 8, 'ytick.labelsize': 8, 'legend.fontsize': 8, 'figure.figsize': (3 * phi, 3), 'figure.subplot.bottom': 0.2, 'figure.subplot.left': 0.2, 'figure.subplot.right': 0.9, 'figure.subplot.top': 0.85, 'figure.subplot.wspace': 0.4, 'text.usetex': False, } # ----------------------------------------------------------------------------- # Source code links # ----------------------------------------------------------------------------- import inspect from os.path import dirname, relpath for name in ['sphinx.ext.linkcode', 'numpydoc.linkcode']: try: __import__(name) extensions.append(name) break except ImportError: pass else: print("NOTE: linkcode extension not found -- no links to source generated") def _get_c_source_file(obj): if issubclass(obj, numpy.generic): return r"_core/src/multiarray/scalartypes.c.src" elif obj is numpy.ndarray: return r"_core/src/multiarray/arrayobject.c" else: # todo: come up with a better way to generate these return None def linkcode_resolve(domain, info): """ Determine the URL corresponding to Python object """ if domain != 'py': return None modname = info['module'] fullname = info['fullname'] submod = sys.modules.get(modname) if submod is None: return None obj = submod for part in fullname.split('.'): try: obj = getattr(obj, part) except Exception: return None # strip decorators, which would resolve to the source of the decorator # possibly an upstream bug in getsourcefile, bpo-1764286 try: unwrap = inspect.unwrap except AttributeError: pass else: obj = unwrap(obj) fn = None lineno = None if isinstance(obj, type): # Make a poor effort at linking C extension types if obj.__module__ == 'numpy': fn = _get_c_source_file(obj) # This can be removed when removing the decorator set_module. Fix issue #28629 if hasattr(obj, '_module_source'): obj.__module__, obj._module_source = obj._module_source, obj.__module__ if fn is None: try: fn = inspect.getsourcefile(obj) except Exception: fn = None if not fn: return None # Ignore re-exports as their source files are not within the numpy repo module = inspect.getmodule(obj) if module is not None and not module.__name__.startswith("numpy"): return None try: source, lineno = inspect.getsourcelines(obj) except Exception: lineno = None fn = relpath(fn, start=dirname(numpy.__file__)) if lineno: linespec = "#L%d-L%d" % (lineno, lineno + len(source) - 1) else: linespec = "" if isinstance(obj, type) and hasattr(obj, '_module_source'): obj.__module__, obj._module_source = obj._module_source, obj.__module__ if 'dev' in numpy.__version__: return f"https://github.com/numpy/numpy/blob/main/numpy/{fn}{linespec}" else: return "https://github.com/numpy/numpy/blob/v%s/numpy/%s%s" % ( numpy.__version__, fn, linespec) from pygments.lexer import inherit from pygments.lexers import CLexer from pygments.token import Comment class NumPyLexer(CLexer): name = 'NUMPYLEXER' tokens = { 'statements': [ (r'@[a-zA-Z_]*@', Comment.Preproc, 'macro'), inherit, ], } # ----------------------------------------------------------------------------- # Breathe & Doxygen # ----------------------------------------------------------------------------- breathe_projects = {'numpy': os.path.join("..", "build", "doxygen", "xml")} breathe_default_project = "numpy" breathe_default_members = ("members", "undoc-members", "protected-members") # See https://github.com/breathe-doc/breathe/issues/696 nitpick_ignore += [ ('c:identifier', 'FILE'), ('c:identifier', 'size_t'), ('c:identifier', 'PyHeapTypeObject'), ] # ----------------------------------------------------------------------------- # Interactive documentation examples via JupyterLite # ----------------------------------------------------------------------------- global_enable_try_examples = True try_examples_global_button_text = "Try it in your browser!" try_examples_global_warning_text = ( "NumPy's interactive examples are experimental and may not always work" " as expected, with high load times especially on low-resource platforms," " and the version of NumPy might not be in sync with the one you are" " browsing the documentation for. If you encounter any issues, please" " report them on the" " [NumPy issue tracker](https://github.com/numpy/numpy/issues)." )